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result
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updated 5.4 years ago
by
Istvan Albert
RNA-Seq differential expression with alignments and using three different statistical methods.
A common RNA-Seq data analysis approach is one where sequencing reads are aligned with a "splice" aware aligner.
In this recipe we run follow the concepts presented in chapter:
https://www.biostarhandbook.com/rnaseq/rnaseq-griffith-data.html
and produce differential expression results with three different statistical methods: deseq1
, deseq2
and edgeR