Bioinformatics Data Analysis

Results generated by running the recipe.

Parameters used during the run:

Output Messages
Messages printed to the standard output stream:


        
Other Messages
Messages printed to the standard error stream:
+ wget -q -nc http://data.biostarhandbook.com/rnaseq/code/deseq1.r
+ wget -q -nc http://data.biostarhandbook.com/rnaseq/code/deseq2.r
+ wget -q -nc http://data.biostarhandbook.com/rnaseq/code/edger.r
+ wget -q -nc http://data.biostarhandbook.com/rnaseq/code/counts.txt
+ cat counts.txt
+ Rscript deseq1.r 3x3
+ cat counts.txt
+ Rscript deseq2.r 3x3
+ cat counts.txt
+ Rscript edger.r 3x3
+ wget -q -nc http://data.biostarhandbook.com/rnaseq/code/draw-heatmap.r
+ cat norm-matrix-deseq1.txt
+ Rscript draw-heatmap.r
+ cat norm-matrix-deseq2.txt
+ Rscript draw-heatmap.r
+ cat norm-matrix-edgeR.txt
+ Rscript draw-heatmap.r

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